Implementing the above (to have a lightbox open to display an image when it is clicked) into galleries created by WP-Juicebox can be done but would require quite a bit of work as the plugin does not have any built-in lightbox-style functionality, does not have interface support for linkURL or linkTarget and the embedding code that the plugin provides would have to be modified to include the custom JavaScript code required.
(1) Install and activate WP-Juicebox.
(2) Upgrade WP-Juicebox to Juicebox-Pro following the instructions here (required for setting imageClickMode="OPEN_URL" and for using the Juicebox-Pro API).
(3) Install and activate the Shadowbox JS plugin (and download the Shadowbox source files from within the plugin's settings page).
(4) Open the 'wp-juicebox/config.php' file in a plain text editor and change all three instances (on lines 47, 74 and 98) of:
$image_element->setAttribute('linkURL', $image_url);
... to:
$image_element->setAttribute('linkURL', 'javascript: func();');
(5) Also, in the same file, change all three instances (on lines 48, 75 and 99) of:
$image_element->setAttribute('linkTarget', '_blank');
... to:
$image_element->setAttribute('linkTarget', '_self');
(6) Open the 'wp-juicebox/wp-juicebox.php' file in a plain text editor and change lines 240-251 (the $string_builder section) to the following:
$string_builder = '<!--START JUICEBOX EMBED-->' . PHP_EOL;
$string_builder .= '<script type="text/javascript">' . PHP_EOL;
$string_builder .= ' var jb;' . PHP_EOL;
$string_builder .= ' jQuery(document).ready(function () {' . PHP_EOL;
$string_builder .= ' jb = new juicebox({' . PHP_EOL;
$string_builder .= ' backgroundColor: "' . $background_color . '",' . PHP_EOL;
$string_builder .= ' configUrl: "' . $config_url . '",' . PHP_EOL;
$string_builder .= ' containerId: "juicebox-container-' . $gallery_id . '",' . PHP_EOL;
$string_builder .= ' galleryHeight: "' . $gallery_height . '",' . PHP_EOL;
$string_builder .= ' galleryWidth: "' . $gallery_width . '"' . PHP_EOL;
$string_builder .= ' });' . PHP_EOL;
$string_builder .= ' });' . PHP_EOL;
$string_builder .= ' function func() {' . PHP_EOL;
$string_builder .= ' var index = jb.getImageIndex();' . PHP_EOL;
$string_builder .= ' var info = jb.getImageInfo(index);' . PHP_EOL;
$string_builder .= ' var url = info.imageURL;' . PHP_EOL;
$string_builder .= ' var title = info.title;' . PHP_EOL;
$string_builder .= ' Shadowbox.open({' . PHP_EOL;
$string_builder .= ' content: url,' . PHP_EOL;
$string_builder .= ' player: "img",' . PHP_EOL;
$string_builder .= ' title: title' . PHP_EOL;
$string_builder .= ' });' . PHP_EOL;
$string_builder .= ' }' . PHP_EOL;
$string_builder .= '</script>' . PHP_EOL;
$string_builder .= '<div id="juicebox-container-' . $gallery_id . '"></div>' . PHP_EOL;
$string_builder .= '<!--END JUICEBOX EMBED-->' . PHP_EOL;
(7) Enter imageClickMode="OPEN_URL" in the Pro Options text area of your gallery's settings window.
Please note that the procedure above has not been tested extensively and I cannot vouch for the robustness of the solution or the stability of WP-Juicebox itself after making these modifications.
However, I hope it help and at least points you in the right direction.
[The line numbers above refer to the current version of WP-Juicebox (v1.4.0.1).]